Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787247.1_cds_XP_016501329.1_16
CDS Infomation

[gene=LOC107819422] [db_xref=GeneID:107819422] [protein=probable protein phosphatase 2C 51] [protein_id=XP_016501329.1] [location=complement(join(15098..15465,16003..16108,17155..17895))] [gbkey=CDS]
Sequence

ATGATTGATAACCTTAAAGATACGTCGCCGGCAGCCGAAAGAGGTTGTCGGCTAACGGCG
TTAATGGAGTCCGGTGGAATAGCAAAAGTAGATCTTAACGAGAAACATCAAAATTTCGCT
CGTCAAAAGAGATTGAATGTACGTCGATTGAAAAAATTGTCGGAAAATTTCCGTTTCTAT
GCCGCCGATTACAGGTATTATAAGAGGAAAAAACCTGAAAATAATAGCGTAACTGATGGT
GTAATTACTGTTGATCAAGTTCAACTGGGGACTACTTCCAGTGAAGTGAAAACAGTAAGA
GAGAGGTTACAACGTGTCACGTGCGGGTCGCATGGGTTGATATCGTTGATCGGTCGAAGA
CGAGAAATGGAAGATGCAGTAACAGTGAAGCCGGGGTTGTTGAGTAAAGGTAATAGAAAG
TATGATTTTTTCGGAGTTTACGATGGGCATGGAGGGTCACGTGCAGCGCACGTTTGCCGT
GAATGGCTGCACCGTTTGGTGATAGAGGAAGTTGTAGAAGAAGAAGATGAAGAGAGTATT
AATTGGGAGAAAGTGATGAGGGAGAGTTTTGTTAAAATGGACGAAGAGGTGGAGAAGAAC
GGGGCGGAAATGGCGACGATGGGATCAACGGCTGTGGTAGCTATGGTGTCAGAGGAAGAA
GTGATTGTTGCCAATTGTGGGGATTCAAGAGCTGTGCTTTCACGTGGTGGAGTTACAGTG
CCTTTGTCTATTGACCATAAGCCTGACAGACCTGATGAGCTGGATAGAATTGAAAATTCA
GGTGGGAAAGTTATAAATTGGAATGGGCATCGAGTCTTAGGAGTTCTTGCTACCTCAAGA
TCCATAGGTGATACCTACCTTAAACCATATGTGATACCAGATCCTGAAGTCAAGGTGAGC
AAAAGGACTGATGCAGATGAGTTCTTAATACTTGCAAGTGACGGACTATGGGATGTCATT
CCAAACGATGTTGCATGTGACGTTACAAGAAGATGTTTGAATGGTCAAATGAAGAGGCCG
TGCTCTCAACAAAGCAAATCCCATAGTAAAATAAACGAGAAAGATGAGCAGACAAGTGAT
GAAGTCAAGAAAGAAAACCTTGCCGCACAGGCAGCTTCCTTCCTTGCAGAATTAGCAATT
GCTCGCGGTAGTGAAGATAACATCAGTGTAATTGTCATTGAATTGAACAGATCTGTATGT
TCGACCAGTAAATAA

Peptide Sequence

PEP ID

XP_016501329.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 51 [Nicotiana tabacum]
Sequence

MIDNLKDTSPAAERGCRLTALMESGGIAKVDLNEKHQNFARQKRLNVRRLKKLSENFRFY
AADYRYYKRKKPENNSVTDGVITVDQVQLGTTSSEVKTVRERLQRVTCGSHGLISLIGRR
REMEDAVTVKPGLLSKGNRKYDFFGVYDGHGGSRAAHVCREWLHRLVIEEVVEEEDEESI
NWEKVMRESFVKMDEEVEKNGAEMATMGSTAVVAMVSEEEVIVANCGDSRAVLSRGGVTV
PLSIDHKPDRPDELDRIENSGGKVINWNGHRVLGVLATSRSIGDTYLKPYVIPDPEVKVS
KRTDADEFLILASDGLWDVIPNDVACDVTRRCLNGQMKRPCSQQSKSHSKINEKDEQTSD
EVKKENLAAQAASFLAELAIARGSEDNISVIVIELNRSVCSTSK

Transcript Sequence

Gene sequence data has not been registered.